PhaBOX: A web server for identifying and characterizing phage contigs in metagenomic data

Posted by klaurent UCAS

Kavli Affiliate: Cheng Peng | First 5 Authors: Jiayu Shang, Cheng Peng, Herui Liao, Xubo Tang, Yanni Sun | Summary: Motivation: There is accumulating evidence showing the important roles of bacteriophages (phages) in regulating the structure and functions of the microbiome. However, lacking an easy-to-use and integrated phage analysis software hampers microbiome-related research from incorporating […]


Continue.. PhaBOX: A web server for identifying and characterizing phage contigs in metagenomic data

PhaBOX: A web server for identifying and characterizing phage contigs in metagenomic data

Posted by klaurent UCAS

Kavli Affiliate: Cheng Peng | First 5 Authors: Jiayu Shang, Cheng Peng, Herui Liao, Xubo Tang, Yanni Sun | Summary: Motivation: There is accumulating evidence showing the important roles of bacteriophages (phages) in regulating the structure and functions of microbiome. However, lacking an easy-to-use and integrated phage analysis software hampers microbiome-related research from incorporating phages […]


Continue.. PhaBOX: A web server for identifying and characterizing phage contigs in metagenomic data

A diffuse scattering model of ultracold neutrons on wavy surfaces

Posted by klaurent Tokyo

Kavli Affiliate: T. Higuchi | First 5 Authors: S. Imajo, H. Akatsuka, K. Hatanaka, T. Higuchi, G. Ichikawa | Summary: Metal tubes plated with nickel-phosphorus are used in many fundamental physics experiments using ultracold neutrons (UCN) because of their ease of fabrication. These tubes are usually polished to a average roughness of 25-150 nm. However, […]


Continue.. A diffuse scattering model of ultracold neutrons on wavy surfaces

Visualizing the atomic-scale origin of metallic behavior in Kondo insulators

Posted by klaurent Cornell

Kavli Affiliate: J. C. Seamus Davis | First 5 Authors: Harris Pirie, Eric Mascot, Christian E. Matt, Yu Liu, Pengcheng Chen | Summary: A Kondo lattice is often electrically insulating at low temperatures. However, several recent experiments have detected signatures of bulk metallicity within this Kondo insulating phase. Here we visualize the real-space charge landscape […]


Continue.. Visualizing the atomic-scale origin of metallic behavior in Kondo insulators

Constraint on Early Dark Energy from Isotropic Cosmic Birefringence

Posted by klaurent Tokyo

Kavli Affiliate: Eiichiro Komatsu | First 5 Authors: Johannes R. Eskilt, Laura Herold, Eiichiro Komatsu, Kai Murai, Toshiya Namikawa | Summary: Polarization of the cosmic microwave background (CMB) is sensitive to new physics violating parity symmetry, such as the presence of a pseudoscalar "axionlike" field. Such a field may be responsible for early dark energy […]


Continue.. Constraint on Early Dark Energy from Isotropic Cosmic Birefringence

Constraint on Early Dark Energy from Isotropic Cosmic Birefringence

Posted by klaurent Tokyo

Kavli Affiliate: Eiichiro Komatsu | First 5 Authors: Johannes R. Eskilt, Laura Herold, Eiichiro Komatsu, Kai Murai, Toshiya Namikawa | Summary: Polarization of the cosmic microwave background (CMB) is sensitive to new physics violating parity symmetry, such as the presence of a pseudoscalar "axionlike" field. Such a field may be responsible for early dark energy […]


Continue.. Constraint on Early Dark Energy from Isotropic Cosmic Birefringence

SARS-CoV-2 accessory proteins involvement in inflammatory and profibrotic processes through IL11 signaling

Posted by klaurent UCSD / Salk

Kavli Affiliate: Jose Ricardo Suarez | Authors: Blanca Dies, Ana de Lucas-Rius, Laura Mendoza, Transito Garcia, Raul Fernandez, Jose Manuel Suarez, Fatima Milhano, Fernando Corrales, Natalia Redondo, Federica Pedrucci, Sara Zaldivar, Maria Angeles Jimenez, Maria Montoya and Juan Jose Garrido | Summary: SARS-CoV-2, the cause of the COVID19 pandemic, possesses eleven accessory proteins encoded in […]


Continue.. SARS-CoV-2 accessory proteins involvement in inflammatory and profibrotic processes through IL11 signaling

Non-planar snake gaits: from Stigmatic-starts to Sidewinding

Posted by klaurent Harvard

Kavli Affiliate: L. Mahadevan | First 5 Authors: N. Charles, R. Chelakkot, M. Gazzola, B. Young, L. Mahadevan | Summary: Of the vast variety of animal gaits, one of the most striking is the non-planar undulating motion of a sidewinder. But non-planar gaits are not limited to sidewinders. Here we report a new non-planar mode […]


Continue.. Non-planar snake gaits: from Stigmatic-starts to Sidewinding

Activity-dependent subcellular compartmentalization of dendritic mitochondria structure in CA1 pyramidal neurons

Posted by klaurent Columbia

Kavli Affiliate: Franck Polleux | Authors: Daniel M Virga, Stevie Hamilton, Bertha Osei, Abigail Morgan, Emiliano Zamponi, Natalie J Park, Victoria L Hewitt, David Zhang, Kevin C Gonzalez, Erik Bloss, Franck Polleux and Tommy L Lewis, Jr. | Summary: Neuronal mitochondria play important roles beyond ATP generation, including Ca2+ uptake, and therefore have instructive roles […]


Continue.. Activity-dependent subcellular compartmentalization of dendritic mitochondria structure in CA1 pyramidal neurons

SLAPSHOT reveals rapid dynamics of extracellularly exposed proteome in response to calcium-activated plasma membrane phospholipid scrambling

Posted by klaurent UCSF

Kavli Affiliate: Yuh Nung Jan, Lily Jan | Authors: Sami Tapio Tuomivaara, Chin Fen Teo, Yuh Nung Jan, Lily Y Jan and Arun Paul Wiita | Summary: To facilitate our understanding of the often rapid and nuanced dynamics of extracellularly exposed proteomes during signaling events, it is important to devise robust workflows affording fast time […]


Continue.. SLAPSHOT reveals rapid dynamics of extracellularly exposed proteome in response to calcium-activated plasma membrane phospholipid scrambling