Neuroscience – Page 126 – Kavli Institute Pre-Print Publications

The spatial distribution and temporal trends of livestock damages caused by wolves in Europe

Posted by klaurent July 13, 2022July 25, 2022UCSD / Salk

Kavli Affiliate: Jose Suarez Lopez | Authors: Liam Singer, Xenia Wietlisbach, Raffael Hickisch, Eva Maria Schoell, Angela Van den Broek, Manon Désalme, Koen Driesen, Mari Lyly, Francesca Marucco, Miroslav Kutal, Nives Pagon, Cristian Remus Papp, Paraskevi Milioni, Remigijus Uzdras, Ilgvars Zihmanis, Fridolin Zimmermann, Katrina Marsden, Klaus Hackländer, José Vicente López-Bao, Sybille Klenzendorf and Daniel Wegmann […]

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Pulsatile electrical stimulation creates predictable, correctable disruptions in neural firing

Posted by klaurent July 13, 2022July 25, 2022Hopkins

Kavli Affiliate: Kathleen Cullen | Authors: Cynthia R Steinhardt, Diana E Mitchell, Kathleen E Cullen and Gene Y Fridman | Summary: Electrical stimulation of neural responses is used both scientifically in brain mapping studies and in many clinical applications such as cochlear, vestibular, and retinal implants. Due to safety considerations, stimulation of the nervous system […]

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Converging pathways found in copy number variation syndromes with high schizophrenia risk

Posted by klaurent July 12, 2022July 25, 2022Hopkins

Kavli Affiliate: David Linden | Authors: Friederike Ehrhart, Ana Silva, Therese Amelsvoort, Emma von Scheibler, Chris Evelo and David E.J. Linden | Summary: Schizophrenia genetics is complex, and the contribution of common and rare variants are not fully understood. Several specific copy number variations (CNVs) confer increased risk for schizophrenia, and the study of their […]

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Compression-enabled interpretability of voxel-wise encoding models

Posted by klaurent July 11, 2022July 25, 2022UCSF

Kavli Affiliate: Reza Abbasi-Asl | Authors: Fatemeh Kamali, Amir Abolfazl Suratgar, Mohammadbagher Menhaj and Reza Abbasi-Asl | Summary: Voxel-wise encoding models based on convolutional neural networks (CNNs) have emerged as state-of-the-art predictive models of brain activity evoked by natural movies. Despite the superior predictive performance of CNN-based models, the huge number of parameters in these […]

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Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R, and GenePattern Notebook implementations of CoGAPS

Posted by klaurent July 11, 2022July 25, 2022Hopkins

Kavli Affiliate: Loyal Goff | Authors: Jeanette Anna Irene Johnson, Ashley Tsang, Jacob T Mitchell, Emily F Davis-Marcisak, Thomas Sherman, Ted Liefeld, Melanie Loth, Loyal Goff, Jacquelyn Zimmerman, Ben Kinny-Köster, Elizabeth Jaffee, Pablo Tamayo, Jill Mesirov, Michael Reich, Elana J Fertig and Genevieve L Stein-O’Brien | Summary: Non-negative matrix factorization (NMF) is an unsupervised learning […]

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Dynamics of Borrelia Burgdorferi Invasion and Intravasation in a Tissue Engineered Dermal Microvessel Model

Posted by klaurent July 10, 2022July 18, 2022Hopkins

Kavli Affiliate: Peter Searson | Authors: Zhaobin Guo, Nan Zhao, Tracy D. Chung, Anjan Singh, Ikshu Pandey, Linus Wang, Xinyue Gu, Aisha Ademola, Raleigh Miller Linville, Utpal Pal, J. Stephen Dumler and Peter C. Searson | Summary: Lyme disease is a tick-borne disease prevalent in North America, Europe, and Asia. Dissemination of vector-borne pathogens, such […]

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Large-scale capture of hidden fluorescent labels for training generalizable markerless motion capture models

Posted by klaurent July 10, 2022July 18, 2022UCSD / Salk

Kavli Affiliate: Eiman Azim | Authors: Daniel J Butler, Alexander P Keim, Shantanu Ray and Eiman Azim | Summary: Recent advances in deep learning-based markerless pose estimation have dramatically improved the scale and ease with which body landmarks can be tracked in studies of animal behavior. However, pose estimation for animals in a laboratory setting […]

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A Draft Human Pangenome Reference

Posted by klaurent July 9, 2022July 18, 2022Rockefeller

Kavli Affiliate: Erich Jarvis | Authors: Wen-Wei Liao, Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Glenn Hickey, Shuangjia Lu, Julian K. Lucas, Jean Monlong, Haley J. Abel, Silvia Buonaiuto, Xian H. Chang, Haoyu Cheng, Justin Chu, Vincenza Colonna, Jordan M. Eizenga, Xiaowen Feng, Christian Fischer, Robert S. Fulton, Shilpa Garg, Cristian Groza, Andrea Guarracino, […]

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Object-centered population coding in CA1 of the hippocampus

Posted by klaurent July 8, 2022July 18, 2022NTNU

Kavli Affiliate: Edvard Moser, May-Britt Moser | Authors: Anne Nagelhus, Sebastian Andersson, Soledad Gonzalo Cogno, Edvard I. Moser and May-Britt Moser | Summary: Objects and landmarks are crucial for guiding navigation and must be integrated into the cognitive map of space. Studies of object coding in the hippocampus have primarily focused on activity of single […]

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Increased mutation rate and interlocus gene conversion within human segmental duplications.

Posted by klaurent July 7, 2022July 18, 2022Columbia

Kavli Affiliate: Michael Goldberg | Authors: Mitchell R. Vollger, William S. DeWitt, Philip C. Dishuck, William T. Harvey, Xavi Guitart, Michael E. Goldberg, Allison Rozanski, Julian Lucas, Mobin Asri, The Human Pangenome Reference Consortium, Katherine M. Munson, Alexandra P. Lewis, Kendra Hoekzema, Glennis A. Logsdon, David Porubsky, Benedict Paten, Kelley Harris, PingHsun Hsieh and Evan […]

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