Genetically encoded assembly recorder temporally resolves cellular histories in cellulo and in vivo

Kavli Affiliate: Dwight Bergles | Authors: Yuqing Yan, Jiaxi Lu, Zhe Li, Zuo-Han Zhao, Timothy F. Shay, Shunzhi Wang, Yaping Lei, Yimei Wang, Wei Chen, Patrick Parker, Hongru Yang, Aileen Qi, Yongzhi Sun, Dwight Bergles, David Baker and Dingchang Lin | Summary: Mapping cellular activity with high spatiotemporal precision in complex tissues is essential for […]


Continue.. Genetically encoded assembly recorder temporally resolves cellular histories in cellulo and in vivo

Statistically valid explainable black-box machine learning: applications in sex classification across species using brain imaging

Kavli Affiliate: Joshua Vogelstein | Authors: Tingshan Liu, Jayanta Dey, Beiya Xu, Samuel S Alldritt, Karl-Heinz Nenning, Kyoungseob Byeon, Ting Xu and Joshua T. Vogelstein | Summary: Sex classification using neuroimaging data has the potential to revolutionize personalized diagnostics by revealing subtle structural brain differences that underlie sex-specific disease risks. Despite the promise of machine […]


Continue.. Statistically valid explainable black-box machine learning: applications in sex classification across species using brain imaging

Cell type-specific barcoding reveals the projectional architecture of the mouse midbrain dopaminergic system

Kavli Affiliate: Justus M Kebschull | Authors: Hyopil Kim, Cheng Xu, Craig Washington, Maggie Lowman and Justus M Kebschull | Summary: Brain-wide neural circuits are formed by the diverse axonal branching patterns of many individual neurons. Here we introduce POlNTseq (projections of interest by sequencing), a high-throughput and user-friendly barcoded connectomics method that uses cell […]


Continue.. Cell type-specific barcoding reveals the projectional architecture of the mouse midbrain dopaminergic system

Dynamic extracellular interactions with AMPA receptors

Kavli Affiliate: Richard Huganir | Authors: Hana Goldschmidt Merrion, Casey N. Barber, Santosh S. Renuse, Jevon Cutler, Simion Kreimer, Alexei M. Bygrave, David J. Meyers, William Dylan Hale, Akhilesh Pandey and Richard L. Huganir | Summary: Synaptic plasticity in the central nervous system enables the encoding, storing, and integrating new information. AMPA-type glutamate receptors (AMPARs) […]


Continue.. Dynamic extracellular interactions with AMPA receptors

Mapping the projectional architecture of the mouse midbrain dopaminergic system using cell type-specific barcoding

Kavli Affiliate: Justus M Kebschull | Authors: Hyopil Kim, Cheng Xu, Craig Washington, Maggie Lowmann and Justus M Kebschull | Summary: Brain-wide neural circuits are formed by the diverse axonal branching patterns of many individual neurons. Here we introduce POINTseq (projections of interest by sequencing), a high-throughput and user-friendly barcoded connectomics method that uses cell […]


Continue.. Mapping the projectional architecture of the mouse midbrain dopaminergic system using cell type-specific barcoding

Architecture, Activation, and Conformational Plasticity in the GluA4 AMPA Receptor

Kavli Affiliate: Richard Huganir | Authors: William Dylan Hale, Richard L. Huganir and Edward C Twomey | Summary: AMPA-subtype glutamate receptors (AMPARs), composed of subunits GluA1-4, mediate fast, excitatory synaptic transmission in the brain. After glutamate binding, AMPAR ion channels exhibit multiple subconductance states that tune neuronal responses to glutamate. GluA4 is the rarest subunit […]


Continue.. Architecture, Activation, and Conformational Plasticity in the GluA4 AMPA Receptor

xIV-LDDMM Toolkit: A Suite of Image-Varifold Based Technologies for Representing and Mapping 3D Imaging and Spatial-omics Data Simultaneously Across Scales

Kavli Affiliate: Laurent Younes and Michael Miller | Authors: Kaitlin Stouffer, Xiaoyin Chen, Hongkui Zeng, Benjamin Charlier, Laurent Younes, Alain Trouve and Michael I Miller | Summary: Advancements in imaging and molecular techniques enable the collection of subcellular-scale data. Diversity in measured features, resolution, and physical scope of capture across technologies and experimental protocols pose […]


Continue.. xIV-LDDMM Toolkit: A Suite of Image-Varifold Based Technologies for Representing and Mapping 3D Imaging and Spatial-omics Data Simultaneously Across Scales

Full inter-hemispheric integration sustained by a fraction of posterior callosal fibers

Kavli Affiliate: Michael Miller | Authors: Tyler Santander, Selin Bekir, Theresa Paul, Jessica M Simonson, Valerie M Wiemer, Henri Etel Skinner, Johanna L Hopf, Anna Rada, Friedrich G Woermann, Thilo Kalbhenn, Barry Giesbrecht, Christian G Bien, Olaf Sporns, Michael S Gazzaniga, Lukas J Volz and Michael B Miller | Summary: The dynamic integration of the […]


Continue.. Full inter-hemispheric integration sustained by a fraction of posterior callosal fibers

Temporally-segregated dual functions for Gfi1 in the development of retinal direction-selectivity

Kavli Affiliate: Alex Kolodkin | Authors: Karina Chaudhari, Luis E Guzman-Clavel and Alex L Kolodkin | Summary: There is great diversity in retinal ganglion cells subtypes in the mouse retina, but little is known about the molecular factors required to generate this subtype diversity. Here, we identify the transcription factor Gfi1 as a conserved driver […]


Continue.. Temporally-segregated dual functions for Gfi1 in the development of retinal direction-selectivity

Fentanyl reinforcement history has sex-specific effects on multi-step decision-making

Kavli Affiliate: Patricia Janak | Authors: Eric Garr, Yifeng Cheng, Andy Dong and Patricia H. Janak | Summary: It is commonly thought that drug addiction involves a transition to habitual control of action, where the choice to consume drugs becomes automatized and reflects a failure to deliberate over possible negative outcomes. Determining whether the pursuit […]


Continue.. Fentanyl reinforcement history has sex-specific effects on multi-step decision-making