Whole-brain neural substrates of behavioral variability in the larval zebrafish

Kavli Affiliate: Alipasha Vaziri | Authors: Jason Manley and Alipasha Vaziri | Summary: Animals engaged in naturalistic behavior can exhibit a large degree of behavioral variability even under sensory invariant conditions. Such behavioral variability can include not only variations of the same behavior, but also variability across qualitatively different behaviors driven by divergent cognitive states, […]


Continue.. Whole-brain neural substrates of behavioral variability in the larval zebrafish

Opto-CLIP reveals dynamic FMRP regulation of mRNAs upon CA1 neuronal activation

Kavli Affiliate: Robert B. Darnell and Nathaniel Heintz | Authors: Ruth A Singer, Veronika Rajchin, Kwanghoon Park, Nathaniel Heintz and Robert B Darnell | Summary: Neuronal diversity and function are intricately linked to the dynamic regulation of RNA metabolism, including splicing, localization, and translation. Electrophysiologic studies of synaptic plasticity, models for learning and memory, are […]


Continue.. Opto-CLIP reveals dynamic FMRP regulation of mRNAs upon CA1 neuronal activation

Convergence of autism proteins at the cilium

Kavli Affiliate: Jeremy Willsey | Authors: Elina Kostyanovskaya, Micaela C. Lasser, Belinda Wang, James Schmidt, Ethel Bader, Chad Buteo, Juan Arbelaez, Aria Rani Sindledecker, Kate E. McCluskey, Octavio Castillo, Sheng Wang, Jeanselle Dea, Kathryn A. Helde, J. Michael Graglia, Elise Brimble, David B. Kastner, Aliza T. Ehrlich, Matthew W. State, A. Jeremy Willsey and Helen […]


Continue.. Convergence of autism proteins at the cilium

Omics-based insights into human liver reveal GTPase-driven mechanisms of MASLD progression in obesity

Kavli Affiliate: Li Zhao | Authors: Qing Zhao, William de Nardo, Ruoyu Wang, Yi Zhong, Umur Keles, Li Na Zhao, Huiyi Tay, Sonia Youhanna, Mengchao Yan, Ye Xie, Youngrae Kim, Sungdong Lee, Rachel Liyu Lim, Guoshou Teo, Pradeep Naraya, Paul R Burton, Volker M Lauschke, Hyungwon Choi, Matthew J Watt and Philipp Kaldis | Summary: […]


Continue.. Omics-based insights into human liver reveal GTPase-driven mechanisms of MASLD progression in obesity

Mitochondria transported by Kinesin 3 prevent localized calcium spiking to inhibit caspase-dependent specialized cell death

Kavli Affiliate: Shai Shaham | Authors: Rashna Sharmin, Aladin Elkhalil, Sara Pena, Pranya Gaddipati, Ginger Clark, Pavak K Shah, Mark W Pellegrino, Shai Shaham and Piya Ghose | Summary: Polarized cells (such as neurons), defined by distinct compartments are, like many cell types, subject to developmental elimination, as in neurite pruning. The molecular mechanism behind […]


Continue.. Mitochondria transported by Kinesin 3 prevent localized calcium spiking to inhibit caspase-dependent specialized cell death

C. elegans LET-381/FoxF and DMD-4/DMRT control development of the mesodermal HMC endothelial cell

Kavli Affiliate: Shai Shaham | Authors: Nikolaos Stefanakis, Jasmine Xi, Jessica Jiang and Shai Shaham | Summary: Endothelial cells form the inner layer of blood vessels and play key roles in circulatory system development and function. A variety of endothelial cell types have been described through gene expression and transcriptome studies; nonetheless, the transcriptional programs […]


Continue.. C. elegans LET-381/FoxF and DMD-4/DMRT control development of the mesodermal HMC endothelial cell

Gene regulatory networks and essential transcription factors for de novo originated genes

Kavli Affiliate: Li Zhao | Authors: Junhui Peng, Bing-Jun Wang, Nicolas Svetec and Li Zhao | Summary: The regulation of gene expression is crucial for the functional integration of evolutionarily young genes, particularly those that emerge de novo. However, the regulatory programs governing the expression of de novo genes remain unknown. To address this, we […]


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Functional organization and natural scene responses across mouse visual cortical areas revealed with encoding manifolds – Copy

Kavli Affiliate: Roderick MacKinnon | Authors: Venkata Shiva Mandala and Roderick MacKinnon | Summary: Gating in voltage-dependent ion channels is regulated by the transmembrane voltage. This form of regulation is enabled by voltage sensing domains (VSDs) that respond to transmembrane voltage differences by changing their conformation and exerting force on the pore to open or […]


Continue.. Functional organization and natural scene responses across mouse visual cortical areas revealed with encoding manifolds – Copy

ELAVL3 regulates splicing of RNAs encoding synaptic signaling proteins in D1 and D2 striatal medium spiny neurons.

Kavli Affiliate: Robert B. Darnell | Authors: Krithi Irmady, Claudia Scheckel, Ruth A Singer, Thomas Carroll and Robert B Darnell | Summary: The neuronal RNA-binding protein (RBP) family nELAVL regulates key neuronal processes by binding directly to target RNA transcripts. In this study, we demonstrate that ELAVL3 is the predominant nELAVL paralog expressed in D1 […]


Continue.. ELAVL3 regulates splicing of RNAs encoding synaptic signaling proteins in D1 and D2 striatal medium spiny neurons.

Quantitative guiding of developmental cell fate transitions using gene-free modelling

Kavli Affiliate: Eric D. Siggia | Authors: Ismail Hajji, Eric D Siggia, Francis Corson and Wolfgang Keil | Summary: During development, cells gradually assume specialized fates via changes of transcriptional dynamics in thousands of genes. Terminal cell identities are then stabilized through the convergence of gene regulatory network dynamics and the accumulation of epigenetic DNA […]


Continue.. Quantitative guiding of developmental cell fate transitions using gene-free modelling