GeneCover: A Combinatorial Approach for Label-free Marker Gene Selection

Kavli Affiliate: Donald Geman | Authors: An Wang, Stephanie C Hicks, Donald Geman and Laurent Younes | Summary: The selection of marker gene panels is critical for capturing the cellular and spatial heterogeneity in the expanding atlases of single-cell RNA sequencing (scRNA-seq) and spatial transcriptomics data. Most current approaches to marker gene selection operate in […]


Continue.. GeneCover: A Combinatorial Approach for Label-free Marker Gene Selection

Control of tongue movements by the Purkinje cells of the cerebellum

Kavli Affiliate: Reza Shadmehr | Authors: Paul Hage, Mohammad Amin Fakharian, Alden M. Shoup, Jay S Pi, Ehsan Sedaghat-Nejad, Simon P Orozco, In Kyu Jang, Vivian Looi, Toren Arginteanu and Reza Shadmehr | Summary: We use our tongue much like our hands: to interact with objects and transport them. For example, we use our hands […]


Continue.. Control of tongue movements by the Purkinje cells of the cerebellum

Viral-mediated Oct4 overexpression and inhibition of Notch signaling synergistically induce neurogenic competence in mammalian Muller glia.

Kavli Affiliate: Seth Blackshaw | Authors: Nguyet Le, Sherine Awad, Isabella Palazzo, Thanh Hoang and Seth Blackshaw | Summary: Retinal Müller glia in cold-blooded vertebrates can reprogram into neurogenic progenitors to replace neurons lost to injury, but mammals lack this ability. While recent studies have shown that transgenic overexpression of neurogenic bHLH factors and glial-specific […]


Continue.. Viral-mediated Oct4 overexpression and inhibition of Notch signaling synergistically induce neurogenic competence in mammalian Muller glia.

A vector calculus for neural computation in the cerebellum

Kavli Affiliate: Reza Shadmehr | Authors: Mohammad Amin Fakharian, Alden Shoup, Paul Hage, Hisham Elseweifi and Reza Shadmehr | Summary: Null space theory predicts that a neuron will often generate spikes not to produce behavior, but to prevent another neuron’s impact on behavior. Here, we present a direct test of this theory in the brain. […]


Continue.. A vector calculus for neural computation in the cerebellum

Striatal and cerebellar interactions during reward-based motor performance

Kavli Affiliate: Kathleen Cullen and Vikram Chib | Authors: Joonhee Leo Lee, Agostina Casamento-Moran, Amy J Bastian, Kathleen E Cullen and Vikram S. Chib | Summary: Goal-directed motor performance relies on the brain’s ability to distinguish between actions that lead to successful and unsuccessful outcomes. The basal ganglia (BG) and cerebellum (CBL) are integral to […]


Continue.. Striatal and cerebellar interactions during reward-based motor performance

Network Biomarkers of Alzheimer’s Disease Risk Derived from Joint Volume and Texture Covariance Patterns in Mouse Models

Kavli Affiliate: Joshua Vogelstein | Authors: Eric W Bridgeford, Jaewon Chung, Robert J Anderson, Ali Mahzarnia, Jacques A Stout, Hae Sol Moon, Zay Yar Han, Joshua T Vogelstein and Alexandra Badea | Summary: Alzheimer’s disease (AD) lacks effective cures and is typically detected after substantial pathological changes have occurred, making intervention challenging. Early detection and […]


Continue.. Network Biomarkers of Alzheimer’s Disease Risk Derived from Joint Volume and Texture Covariance Patterns in Mouse Models

Cigarette smoke and biological age induce degenerative heterogeneity in retinal pigment epithelium

Kavli Affiliate: Seth Blackshaw | Authors: Krishna Singh, yang jin, Mingwen Hu, Isabella Pallazo, Marisol Cano,, Thanh Hoang, Imran Bhutto, Shusheng Wang, Debasish Sinha, Seth Blackshaw, Jiang Qian and James T. Handa | Summary: Environmental exposure such as cigarette smoke induces epigenetic changes that can induce degenerative heterogeneity and accelerate aging. In early age-related macular […]


Continue.. Cigarette smoke and biological age induce degenerative heterogeneity in retinal pigment epithelium

KV1.8 (Kcna10) potassium channels enhance fast, linear signaling in vestibular hair cells and facilitate vestibulomotor reflexes and balance

Kavli Affiliate: Kathleen Cullen | Authors: Hannah R Martin, Brandie Morris Verdone, Omar Lopez-Ramirez, Merrill Green, Dana Silvian, Emily Scott, Kathleen E Cullen and Ruth Anne Eatock | Summary: Vestibular hair cells (HCs) faithfully and rapidly detect head motions and gravity, driving motor reflexes that stabilize balance and gaze during locomotion. With the transition from […]


Continue.. KV1.8 (Kcna10) potassium channels enhance fast, linear signaling in vestibular hair cells and facilitate vestibulomotor reflexes and balance

Mitochondrial ROS and HIF-1α signalling mediate critical period plasticity

Kavli Affiliate: Michael Miller | Authors: Daniel Sobrid-Camean, Bramwell Coulson, Michael Miller, Matthew CW Oswald, Tom Pettini, Richard A Baines and Matthias Landgraf | Summary: As developing networks transition from spontaneous irregular to patterned activity, they undergo plastic tuning phases, termed “critical periods”; “critical” because disturbances during these phases can lead to lasting changes in […]


Continue.. Mitochondrial ROS and HIF-1α signalling mediate critical period plasticity

Automatic detection of fluorescently labeled synapses in volumetric in vivo imaging data

Kavli Affiliate: Adam S. Charles and Richard Huganir | Authors: Zhining Chen, Gabrielle I. Coste, Evan Li, Richard L. Huganir, Austin R. Graves and Adam Charles | Summary: Synapses are submicron structures that connect and enable communication between neurons. Many forms of learning are thought to be encoded by synaptic plasticity, wherein the strength of […]


Continue.. Automatic detection of fluorescently labeled synapses in volumetric in vivo imaging data