Kavli Affiliate: Jos Zwanikken | Summary:The problem of successfully simulating ionic fluids at low temperature and low density states is well known in the simulation literature: using conventional methods, the system is not able to equilibrate rapidly due to the presence of strongly associated cation-anion pairs. In this manuscript we present a numerical method for […]
Kavli Affiliate: Jos Zwanikken | Summary:Within a modified Poisson-Boltzmann theory we study the effect of Bjerrum pairs on the typical length scale $1/barκ$ over which electric fields are screened in electrolyte solutions, taking into account a simple association-dissociation equilibrium between free ions and Bjerrum pairs. At low densities of Bjerrum pairs, this length scale is […]
Kavli Affiliate: Martin Depken | Summary:Apart from being the gateway for all access to the eukaryotic genome, chromatin has in recent years been identified as carrying an epigenetic code regulating transcriptional activity. The detailed knowledge of this code contrasts the ignorance of the fiber structure which it regulates, and none of the suggested fiber models […]
Kavli Affiliate: Martin Depken | Summary:The form of the stress tensor is investigated in smooth, dense granular flows which are generated in split-bottom shear geometries. We find that, within a fluctuation fluidized spatial region, the form of the stress tensor is directly dictated by the flow field: The stress and strain-rate tensors are co-linear. The […]
Kavli Affiliate: Marileen Dogterom | Summary:Motivated by the formation of ring-like filament structures in the cortex of plant and animal cells, we study the dynamics of a two-dimensional layer of cytoskeletal filaments and motor proteins near a surface by a general continuum theory. As a result of active processes, dynamic patterns of filament orientation and […]
Kavli Affiliate: Martin Depken | Summary:Slow and dense granular flows often exhibit narrow shear bands, making them ill-suited for a continuum description. However, smooth granular flows have been shown to occur in specific geometries such as linear shear in the absence of gravity, slow inclined plane flows and, recently, flows in split-bottom Couette geometries. The […]
Kavli Affiliate: Marileen Dogterom | Summary:We present computer simulations of long thin hard spherocylinders in a narrow planar slit. We observe a transition from the isotropic to a nematic phase with quasi-long-range orientational order upon increasing the density. This phase transition is intrinsically two dimensional and of the Kosterlitz-Thouless type. The effective two-dimensional density at […]
Kavli Affiliate: Sander Tans | Summary:Carbon nanotubes provide a unique system to study one-dimensional quantization phenomena. Scanning tunneling microscopy is used to observe the electronic wave functions that correspond to quantized energy levels in short metallic carbon nanotubes. Discrete electron waves are apparent from periodic oscillations in the differential conductance as a function of the […]